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논문 기본 정보

자료유형
학술저널
저자정보
Sridharan, Sindhiya (Department of Genetic Engineering, School of Bioengineering, SRM University) Saifullah, Ayesha Zainab (Department of Genetic Engineering, School of Bioengineering, SRM University) Nagarajan, Santhosh Kumar (Department of Genetic Engineering, School of Bioengineering, SRM University) Madhavan, Thirumurthy (Department of Genetic Engineering, School of Bioengineering, SRM University)
저널정보
조선대학교 기초과학연구원 조선자연과학논문집 조선자연과학논문집 제11권 제2호
발행연도
2018.1
수록면
121 - 129 (9page)

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CXCR6 is a major target in drug design as it is a determinant receptor in many diseases like AIDS, Type I Diabetes, some cancer types, atherosclerosis, tumor formation, liver disease and steatohepatitis. In this study, we propose the active site residues of CXCR6 molecule. We employed homology modelling and molecular docking approach to generate the 3D structure for CXCR6 and to explore its interaction between the antagonists and agonists. 3D models were generated using 14 different templates having high sequence identity with CXCR6. Surflex docking studies using pyridine and pyrimidine derivatives enabled the analysis of the binding site and finding of the important residues involved in binding. 3D structure of CXCL16, a natural ligand for CXCR6, was modelled using PHYRE and protein - protein docking was performed using ClusPro. The residues which were found to be crucial in interaction with the ligand are THR110, PHE113, TYR114, GLN160, GLN195, CYS251 and SER255. This study can be used as a guide for therapeutic studies of human CXCR6.

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