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논문 기본 정보

자료유형
학술저널
저자정보
Bak Seong-Kun (Synthetic Biology Research Center Korea Research Institute of Bioscience and Biotechnology 125 Gwah) Seong Wonjae (Synthetic Biology Research Center Korea Research Institute of Bioscience and Biotechnology 125 Gwah) Rha Eugene (Synthetic Biology Research Center Korea Research Institute of Bioscience and Biotechnology 125 Gwah) Lee Hyewon (Synthetic Biology Research Center Korea Research Institute of Bioscience and Biotechnology 125 Gwah) Kim Seong Keun (Synthetic Biology Research Center Korea Research Institute of Bioscience and Biotechnology 125 Gwah) Kwon Kil Koang (Synthetic Biology Research Center Korea Research Institute of Bioscience and Biotechnology 125 Gwah) Kim Haseong (Synthetic Biology Research Center Korea Research Institute of Bioscience and Biotechnology 125 Gwah) Lee Seung-Goo (Synthetic Biology Research Center Korea Research Institute of Bioscience and Biotechnology 125 Gwah)
저널정보
한국미생물생명공학회 Journal of Microbiology and Biotechnology Journal of Microbiology and Biotechnology 제32권 제8호
발행연도
2022.8
수록면
1,026 - 1,033 (8page)
DOI
10.4014/jmb.2207.07013

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초록· 키워드

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This study presents a novel DNA part characterization technique that increases throughput by combinatorial DNA part assembly, solid plate-based quantitative fluorescence assay for phenotyping, and barcode tagging-based long-read sequencing for genotyping. We confirmed that the fluorescence intensities of colonies on plates were comparable to fluorescence at the single-cell level from a high-end, flow-cytometry device and developed a high-throughput image analysis pipeline. The barcode tagging-based long-read sequencing technique enabled rapid identification of all DNA parts and their combinations with a single sequencing experiment. Using our techniques, forty-four DNA parts (21 promoters and 23 RBSs) were successfully characterized in 72 h without any automated equipment. We anticipate that this high-throughput and easy-to-use part characterization technique will contribute to increasing part diversity and be useful for building genetic circuits and metabolic pathways in synthetic biology.

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