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논문 기본 정보
- 자료유형
- 학술저널
- 저자정보
- 발행연도
- 2018.12
- 수록면
- 2,024 - 2,035 (12page)
- DOI
- 10.13000/JFMSE.2018.12.30.6.2024
이용수
초록· 키워드
오류제보하기
We identified structural and non-structural gene regions encoding major capsid protein (MCP) and DNA polymerase (DPOL) of megalocytiviruses collected from infected cultured fishes in RBIVD outbreak farms in 2013-2017 in Korea. With the two PCRs using 1-F/1-R and 4-F/4-R primer sets of the Manual of Diagnosis Tests for Aquatic Animals of the World Organization for Animal Health (OIE), amplicons were generated from the spleen and kidney tissue from approxmately ~30 fishes, including rock bream (Oplegnathus fasciatus), red sea bream (Pagrus major), and rock fish (Sebastes schlegeli), from 15 outbreak regions in the aquatic farms of the South Sea and Jeju Island. In phylogenetic analysis, complete MCP and partial DPOL genes belonged to RSIV type-subgroup2. Interestingly, these genes formed a cluster indicating closer relatedness to GSIV-K1, RIE12-1, and RBIV-C1, which were previously isolated from Japan and China, than with RBIV-KOR-TY1 isolated from Korea. However, the nucleotide sequence identities of the MCP and DPOL genes of these viruses were high, at >99.8% and >99.7%, respectively, compared with RBIV-KOR-TY1. Comparisons of nucleotide and amino acid sequences showed minimal differences between the obtained strains in the MCP gene, however, one or two nucleotide sequences substitutions of the DPOL gene were detected in nine strains, including a silent mutation detected in five strains. These findings suggest a slow rate of evolution of megalocytiviruses in this region, but the potential for mutations and new pathogenic strains warrants continuous surveillance.
목차
Abstract
Ⅰ. Introduction
Ⅱ. Materials and Methods
Ⅲ. Results
Ⅳ. Discussion
References
참고문헌 (28)
참고문헌 신청
[단행본] - Chinchar G / 2005 / Virus Taxonomy, Eighth report of the International Comittee on Taxonomy of Viruses / Academic Press : 145 ~ 162
[학술지(정기간행물)] - Jeong Wan Do / 2004 / Complete genomic DNA sequence of rock bream iridovirus / Virology 325 (2) : 351 ~ 363
[학술지(정기간행물)] - JW Do / 2005 / Phylogenetic analysis of the major capsid protein gene of iridovirus isolates from cultured flounders Paralichthys olivaceus in Korea / Diseases of Aquatic Organisms 64 : 193 ~ 200
[학술지(정기간행물)] - J G He / 2000 / Systemic disease caused by an iridovirus-like agent in cultured mandarinfish, Siniperca chuatsi (Basilewsky), in China / Journal of Fish Diseases 23 (3) : 219 ~ 222
[학술지(정기간행물)] - Sue-Min Huang / 2011 / Genetic analysis of fish iridoviruses isolated in Taiwan during 2001–2009 / Archives of Virology 156 (9) : 1505 ~ 1515
[학술지(정기간행물)] - Jeong Wan Do / 2004 / Complete genomic DNA sequence of rock bream iridovirus / Virology 325 (2) : 351 ~ 363
[학술지(정기간행물)] - JW Do / 2005 / Phylogenetic analysis of the major capsid protein gene of iridovirus isolates from cultured flounders Paralichthys olivaceus in Korea / Diseases of Aquatic Organisms 64 : 193 ~ 200
[학술지(정기간행물)] - J G He / 2000 / Systemic disease caused by an iridovirus-like agent in cultured mandarinfish, Siniperca chuatsi (Basilewsky), in China / Journal of Fish Diseases 23 (3) : 219 ~ 222
[학술지(정기간행물)] - Sue-Min Huang / 2011 / Genetic analysis of fish iridoviruses isolated in Taiwan during 2001–2009 / Archives of Virology 156 (9) : 1505 ~ 1515
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UCI(KEPA) : I410-ECN-0101-2019-454-000146904